Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 99.9 | 9.7e-32 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gklye+
Niben101Scf00061g00002.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 58
79**********************************************95 PP
|
2 | K-box | 102.3 | 6.3e-34 | 80 | 169 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenka 93
e++++s++qe++kLk++ e Lqr+qRhllGedL++LslkeLq+Le+qLe +l + R++K++++ eq+eel++ke++l + nk+
Niben101Scf00061g00002.1 80 CGERETQSWYQEVSKLKAKFEALQRTQRHLLGEDLGPLSLKELQSLEKQLEGALAQARQRKTQIMAEQMEELRRKERQLGDVNKQ 164
67899******************************************************************************** PP
K-box 94 Lrkkl 98
L+ k+
Niben101Scf00061g00002.1 165 LKIKV 169
*9886 PP
|
Protein Features
? help Back to Top |
|
Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
SMART | SM00432 | 3.5E-42 | 1 | 60 | IPR002100 | Transcription factor, MADS-box |
PROSITE profile | PS50066 | 33.683 | 1 | 61 | IPR002100 | Transcription factor, MADS-box |
CDD | cd00265 | 2.08E-44 | 2 | 72 | No hit | No description |
SuperFamily | SSF55455 | 1.96E-33 | 2 | 77 | IPR002100 | Transcription factor, MADS-box |
PRINTS | PR00404 | 8.9E-33 | 3 | 23 | IPR002100 | Transcription factor, MADS-box |
PROSITE pattern | PS00350 | 0 | 3 | 57 | IPR002100 | Transcription factor, MADS-box |
Pfam | PF00319 | 3.4E-27 | 10 | 57 | IPR002100 | Transcription factor, MADS-box |
PRINTS | PR00404 | 8.9E-33 | 23 | 38 | IPR002100 | Transcription factor, MADS-box |
PRINTS | PR00404 | 8.9E-33 | 38 | 59 | IPR002100 | Transcription factor, MADS-box |
Pfam | PF01486 | 8.6E-31 | 82 | 169 | IPR002487 | Transcription factor, K-box |
PROSITE profile | PS51297 | 16.592 | 85 | 179 | IPR002487 | Transcription factor, K-box |
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009553 | Biological Process | embryo sac development |
GO:0009911 | Biological Process | positive regulation of flower development |
GO:0010094 | Biological Process | specification of carpel identity |
GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0048455 | Biological Process | stamen formation |
GO:0048459 | Biological Process | floral whorl structural organization |
GO:0048509 | Biological Process | regulation of meristem development |
GO:0048833 | Biological Process | specification of floral organ number |
GO:0080060 | Biological Process | integument development |
GO:0080112 | Biological Process | seed growth |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |