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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Ctg08087g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 160aa MW: 18635.1 Da PI: 9.1318 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 34.7 | 5.4e-11 | 23 | 144 | 27 | 128 |
NAM 27 kleleevikevdiykvePwdLpk......kvkaeekew......yfFskrdkkyatgkrknra..tksgyWkatgkdkevlsk.. 95 +l+ + +i+ +d+yk ePw + e++w yf ++r+k+ + r r+ + g Wk++ k+k+v+ k Niben101Ctg08087g00001.1 23 ELHDNGFIAMCDVYKQEPWVTYShghstgG---VEDNWdtsiyrYFITPRKKN---KGRFCRTvgKRGGSWKQQDKEKAVTIKsc 101 445556799**********99633443331...22233334433555555443...4567774124589************9977 PP NAM 96 ....kgel..vglkktLvfykgrapkge......ktdWvmheyrl 128 + + +g k++ + ++++ k +W+m+ey l Niben101Ctg08087g00001.1 102 dqrkR--DliIGRMKSMCYTEKNNTKCInsddynDGKWLMKEYVL 144 65433..156**********76555544222232778******87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 12.359 | 1 | 160 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.71E-11 | 25 | 151 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-7 | 39 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence Send to blast |
MILEKGIISS DGFGVSEISF KQELHDNGFI AMCDVYKQEP WVTYSHGHST GGVEDNWDTS 60 IYRYFITPRK KNKGRFCRTV GKRGGSWKQQ DKEKAVTIKS CDQRKRDLII GRMKSMCYTE 120 KNNTKCINSD DYNDGKWLMK EYVLSDPILN KFSNSERKDY |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009622624.1 | 7e-94 | PREDICTED: uncharacterized protein LOC104113990 | ||||
TrEMBL | A0A1J6IJZ5 | 3e-94 | A0A1J6IJZ5_NICAT; Uncharacterized protein | ||||
STRING | XP_009622624.1 | 3e-93 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15008 | 4 | 8 |