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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Neem_9828_f_1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
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| Family |
GATA |
| Protein Properties |
Length: 300aa MW: 34113.4 Da PI: 8.5817 |
| Description |
GATA family protein |
| Gene Model |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 60.9 | 1.6e-19 | 217 | 251 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cg+ kTp+WR gp g+ktLCnaCG++y++ +l
Neem_9828_f_1 217 CQHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRL 251
*******************************9885 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MESLGSVACI PDDLLDFSFD IDEEDDDEHT KPNKRPRNAF SCLNPNGPDS TSLDVFQHDD 60
SSPVFGEAEF LLTRPSFVVT RSLFWRSKRQ RLVGWVRFRE YEELEWLENK DSFPTLETFV 120
EVPNPSFFKQ QSPISVLENS NSSTSSSTNG STITNNTNHG NSIIMNCCDN IRVPVRARSK 180
RRTRRRELQN HDSWWGIQEN VKTVKPVVSK MIIGRKCQHC GAEKTPQWRA GPLGPKTLCN 240
ACGVRYKSGR LVPEYRPASS PTFSSELHSN SHRKVLEMRR QKQLMGLELG LVGVKPVEKG
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