 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Neem_5372_f_12 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
|
| Family |
HB-other |
| Protein Properties |
Length: 195aa MW: 22883.3 Da PI: 6.7798 |
| Description |
HB-other family protein |
| Gene Model |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 29.5 | 1.2e-09 | 122 | 157 | 20 | 55 |
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55
+k +yps++e+ LA+++gL+++q+ +WF N+R ++
Neem_5372_f_12 122 YKWPYPSETEKLALAESTGLDQKQINNWFINQRKRH 157
5679*****************************885 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 195 aa
Download sequence Send
to blast |
MWEMPYKRII RFAILCALGC WVVMTHSKMN YLICITNLCY GQVLMLQFMH FFFDNLTDEK 60
CEGVGSSEED QDNSGGEAEL PEIDPRAEDR ELKNTPLSKK KKKGKLPKEA RQKLLSWWEL 120
HYKWPYPSET EKLALAESTG LDQKQINNWF INQRKRHWKP SEDMQFMVMD GLHPQNAALY 180
MDGHYMGDGP YRLGP
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probably binds to the DNA sequence 5'-TGAC-3'. |
