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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Neem_5183_f_7 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
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| Family |
LBD |
| Protein Properties |
Length: 227aa MW: 25383.3 Da PI: 4.4986 |
| Description |
LBD family protein |
| Gene Model |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 126.6 | 1.1e-39 | 7 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
+C aCk+lrr+C++dC++apyf+ +q + +fa+vhk+FGasnv+kll +lp ++r+da+ ++ yeA ar+rdP+yG+v++i++lqqq+++l++e++
Neem_5183_f_7 7 SCGACKFLRRRCTNDCIFAPYFCYDQaATHFAAVHKVFGASNVSKLLLHLPVQNRSDAAITISYEALARMRDPIYGCVAHIFALQQQVANLQEEIE 102
6************************9789******************************************************************9 PP
DUF260 96 llkee 100
+l+++
Neem_5183_f_7 103 VLENH 107
98876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 227 aa
Download sequence Send
to blast |
MTGLGSSCGA CKFLRRRCTN DCIFAPYFCY DQAATHFAAV HKVFGASNVS KLLLHLPVQN 60
RSDAAITISY EALARMRDPI YGCVAHIFAL QQQVANLQEE IEVLENHMAN HLIGVVYGGN 120
SQAPNEPCDQ SYFSPDLDAM NTLYYQNQQP DQLLLNHEGN INVSQAFGGQ MNTELPSLQG 180
WEEQNFLPDS SPNDALRTLD GMDQENFVYK PWFDINGNAA NLRDPTW
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