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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Neem_4257_f_2 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
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| Family |
Trihelix |
| Protein Properties |
Length: 294aa MW: 33741.1 Da PI: 5.331 |
| Description |
Trihelix family protein |
| Gene Model |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 76.5 | 4.1e-24 | 29 | 122 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
rWt+qe+ +Li++++ +e+r+++ + ++p+W+ v+++++++g++r+p+qC+++w+nl +++kkik++e + ++e++s + + ++l+
Neem_4257_f_2 29 RWTRQETIVLIQGKKVVENRIQECCgmitigsePNEPKWDLVASYCKQHGVNRGPVQCQKRWSNLLGDFKKIKTWELQVKEEVESFWLMRNDLR 122
8*********************95444555555*********************************************9999999998888875 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MAVFCQANPN REQALDGIDD STKTARHPRW TRQETIVLIQ GKKVVENRIQ ECCGMITIGS 60
EPNEPKWDLV ASYCKQHGVN RGPVQCQKRW SNLLGDFKKI KTWELQVKEE VESFWLMRND 120
LRKEMKLPSV FDREVYDVLD GVFAVPAIPF TLVTTTADGK SRVLHEIMAM NEEEEEEAVF 180
DSIRNTTEDE GLFSVYEPSG QEENGNPEKG TTARESSTKT VATPLHISDT VKEKHRGATQ 240
STSQERWKRR RLSLHVSKDI TMEDQLIKVL ERNMSMLNAQ LEVQNINCQL ERSE
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