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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Neem_34780_f_1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
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| Family |
LBD |
| Protein Properties |
Length: 172aa MW: 19750.8 Da PI: 7.0846 |
| Description |
LBD family protein |
| Gene Model |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 130.6 | 6.5e-41 | 14 | 113 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
+CaaCk+lrr+C ++C lapyfp+++++kfa+vhk+FGasnv+k+++ ++e++r+da++++vyeA+ar+rdPvyG++g ++l++ +e+lka+l+
Neem_34780_f_1 14 PCAACKFLRRRCDSNCLLAPYFPQDEREKFACVHKVFGASNVIKMIQMVEETKRDDAVKAIVYEAKARLRDPVYGSAGATFHLHKMVEELKAQLE 108
7*********************************************************************************************9 PP
DUF260 96 llkee 100
++k++
Neem_34780_f_1 109 SIKTQ 113
99876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 172 aa
Download sequence Send
to blast |
MGSQMVLRAR THQPCAACKF LRRRCDSNCL LAPYFPQDER EKFACVHKVF GASNVIKMIQ 60
MVEETKRDDA VKAIVYEAKA RLRDPVYGSA GATFHLHKMV EELKAQLESI KTQVRDSQER 120
RNQLLGILMN VHHQDPVSPL NDAMFAYDDF FIDDGTLAYD PVKFPVECDW IL
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