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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Neem_33765_f_1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
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Family | NAC | ||||||||
Protein Properties | Length: 116aa MW: 13765.6 Da PI: 7.4954 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 36.5 | 1.4e-11 | 12 | 89 | 51 | 128 |
NAM 51 vkaeekewyfFskrdkkyat.gkrknratk.sgyWkatgk.dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++++ yf ++ +kky++ ++ nr+t g Wk t k ++ ++++ + +++v+y+ ++kt+W+m+ey+l Neem_33765_f_1 12 IDSGNEKKYFLTHLEKKYPNnEEVINRQTPsGGSWKITAKyLINIEGEDEKSILKETSFVYYR---VFTQKTQWFMKEYTL 89 56778899***********835567997763778**9999345666657777888889****5...44568********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 17.472 | 1 | 106 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.24E-11 | 14 | 106 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-5 | 19 | 89 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 116 aa Download sequence Send to blast |
MHVMKWNADL AIDSGNEKKY FLTHLEKKYP NNEEVINRQT PSGGSWKITA KYLINIEGED 60 EKSILKETSF VYYRVFTQKT QWFMKEYTLS NQNELPQWAL CVVYYKPGRK SDVNDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79580.3 | 8e-08 | NAC family protein |