 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Neem_28790_f_1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
|
| Family |
Dof |
| Protein Properties |
Length: 262aa MW: 28890 Da PI: 8.7815 |
| Description |
Dof family protein |
| Gene Model |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 125.8 | 1.3e-39 | 21 | 80 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
++++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s
Neem_28790_f_1 21 PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 80
6899******************************************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009639 | Biological Process | response to red or far red light |
| GO:0009845 | Biological Process | seed germination |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 262 aa
Download sequence Send
to blast |
MEEVVSNTCA TRPMLERKAR PQEQLNCPRC NSTNTKFCYY NNYSLTQPRY FCKTCRRYWT 60
EGGSLRNVPV GGGSRKNKRS ISSSASTHKL PDLNPPNLSQ FASQNPKIHK GQDLNLAFQV 120
MHDNHDISQY VEVPKAENNN NNQQNSSLSS SYSSSPVSAL DLLRTGIASR GLDSFIPTPM 180
PDSHTLFSSG FPLQDIKPTL SFSIDGLGDR FGNANGVQEN GGRLFFPFGE LKQISSSTEV 240
DQNKGQGSST GYWNGMLGGG SW
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor specifically involved in the maternal control of seed germination. Regulates transcription by binding to a 5'-AA[AG]G-3' consensus core sequence. May ensure the inactivity of a component that would be activated to trigger germination as a consequence of red light perception. |
