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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Neem_24660_f_1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
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| Family |
bZIP |
| Protein Properties |
Length: 237aa MW: 26132.8 Da PI: 8.935 |
| Description |
bZIP family protein |
| Gene Model |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 33 | 1.4e-10 | 110 | 150 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
k rr+++NReAAr+sR+RKka++++Le +L++ ++L
Neem_24660_f_1 110 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 150
788*************************9777777666555 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 237 aa
Download sequence Send
to blast |
MKTGSQAMGT DVQFGTLSKT LASSDINLPA AIVGSQALSL QKDPQSNLIS VSSGHRENWG 60
ESNMAEASPR TDTSTDDTED KSQKFERGQS TAVVASDSSD KSKEKSGDQK TLRRLAQNRE 120
AARKSRLRKK AYVQQLESSR LKLTQLEQEL QRARQQGIFI SSSGDQSHSM SGNGAAAFDV 180
EYSRWLEEHN RHINELRAAV NSHAGDTELR TIVDNVTTQF DEIFRLKGIA AKADVFR
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
