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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Neem_23419_f_1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
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| Family |
C2H2 |
| Protein Properties |
Length: 268aa MW: 28777 Da PI: 5.308 |
| Description |
C2H2 family protein |
| Gene Model |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.6 | 9.4e-05 | 242 | 265 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
+ C+ C+k+F + s L++H + H
Neem_23419_f_1 242 HACKSCSKTFGSESALQSHSKAkH 265
67*****************98777 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MEFWGVEVKP GQPLKVKPTF DNIIHVSQAS LGESKKEKGR ESVPLFVKFG DQKLVLGTLI 60
TDSIPQLSFD LVFEKEFELS HNWKNGSVYF CGYQTPLPQD SSDEFDMEDS EEDEEMVLPS 120
IPAENGKAGP KVEKAKAAAP KADAAKPAKP SKDISGEEGG SDEEDEEDSE DEDSDEDEET 180
PKKAVLGKKR PAESATKTPV SAKKAKTPAT DGKKGGHVAT PHPAKQGAKT PNVKTPKSGG 240
QHACKSCSKT FGSESALQSH SKAKHAGK
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| Functional Description ? help
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| Source |
Description |
| UniProt | Mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). {ECO:0000250}. |
