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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Neem_16665_f_1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
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| Family |
HB-other |
| Protein Properties |
Length: 191aa MW: 21140.3 Da PI: 9.5022 |
| Description |
HB-other family protein |
| Gene Model |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 62.6 | 6e-20 | 18 | 74 | 1 | 57 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
++kR t++qle+Le+ ++ ++yps++ r+eL+ +lgL++rq ++WF+ rR k++k
Neem_16665_f_1 18 KSKRKMKTASQLEILEKTYAVESYPSEAVRAELSVQLGLSDRQLQMWFCHRRLKDRK 74
689****************************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 191 aa
Download sequence Send
to blast |
MEAASEGEKK KPQEGETKSK RKMKTASQLE ILEKTYAVES YPSEAVRAEL SVQLGLSDRQ 60
LQMWFCHRRL KDRKAPPAKR QPKDSQPPAR LTPAGGNELA GSEFVRGGVA VQRIGADVAA 120
MRRCYEMSLP PPPPPPQRSI AELRAIALVE AQLGEPLRED GPILGVEFDP LPPDAFGRPL 180
GKLFRPEFDK M
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator required for the maintenance of the plant vegetative phase. In association with CHR11 or CHR17 may prevent the early activation of the vegetative-to-reproductive transition by regulating key genes that contribute to flower timing, such as FT, SEP1, SEP3, AGL8/FUL, SOC1 and FLC (PubMed:22694359). Involved in the transcriptional regulation of seed-specific gene expression (PubMed:23872538). {ECO:0000269|PubMed:22694359, ECO:0000269|PubMed:23872538}. |
