PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Neem_16015_f_1
Organism
Azadirachta indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
Family NAC
Protein Properties Length: 72aa    MW: 7940.84 Da    PI: 11.5053
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Neem_16015_f_1genomeNGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.28.9e-1224387128
             NAM  87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     g +++v+++ ++ vg kk +vf  g+ap g+kt+W+m+eyrl
  Neem_16015_f_1   2 GMEEPVFTRANRRVGSKKYFVFQLGEAPAGVKTNWIMQEYRL 43 
                     778999**99******************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100515.185164IPR003441NAC domain
SuperFamilySSF1019419.81E-13250IPR003441NAC domain
PfamPF023652.3E-41443IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    Send to blast
MGMEEPVFTR ANRRVGSKKY FVFQLGEAPA GVKTNWIMQE YRLLDSTTGS ASSSSSSSSR  60
SSSKRRGNSR TT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021896566.12e-19NAC domain-containing protein 104
TrEMBLA0A067EYC82e-15A0A067EYC8_CITSI; Uncharacterized protein
TrEMBLA0A1U8B3S02e-15A0A1U8B3S0_NELNU; NAC domain-containing protein 104-like
TrEMBLA0A2H5PUU02e-15A0A2H5PUU0_CITUN; Uncharacterized protein
TrEMBLV4SY372e-15V4SY37_9ROSI; Uncharacterized protein
STRINGevm.model.supercontig_63.298e-19(Carica papaya)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.19e-12NAC domain containing protein 25