PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Neem_11802_f_1
Organism
Azadirachta indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
Family bZIP
Protein Properties Length: 205aa    MW: 23126.2 Da    PI: 9.285
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Neem_11802_f_1genomeNGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.72.2e-12102160563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr +r ++NRe+ArrsR RKk+ ieeL+  v + ++ N++L ++l +l +   +  +e+
  Neem_11802_f_1 102 KRLKRVISNRESARRSRMRKKKLIEELQLQVNQVQTVNHQLSQKLIRLLESNHQILQEN 160
                     99*********************************************999999888887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.3E-1298162IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.0E-11100156No hitNo description
PROSITE profilePS5021710.335100163IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-11102154No hitNo description
PfamPF001701.2E-10102160IPR004827Basic-leucine zipper domain
CDDcd147026.29E-15103154No hitNo description
PROSITE patternPS000360105120IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MDPLEFKEQH QGNPVQTLLP LCPTYKANLS NMQAMELGDN CLNHANSSQN QEWGSTFSSM  60
LLSKSQFHVP VHVFSPNTSA PGTVSGTLDE GRETRASIVN EKRLKRVISN RESARRSRMR  120
KKKLIEELQL QVNQVQTVNH QLSQKLIRLL ESNHQILQEN AQLKEKVSSL QMVLSDLLTP  180
LRGLEEVNGN TNHLRAEASS LSIHQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006485842.27e-91basic leucine zipper 43
RefseqXP_024045346.18e-91basic leucine zipper 43
TrEMBLA0A2H5Q4R13e-85A0A2H5Q4R1_CITUN; Uncharacterized protein
STRINGXP_006485842.12e-90(Citrus sinensis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM61852545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.13e-28basic leucine-zipper 70