PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_026203-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

bZIP

Protein Properties

Length: 274aa MW: 30508.3 Da PI: 9.8456

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_026203-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.7	1.6e-15	222	265	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk+ NNU_026203-RA 222 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKKQ 265 79***************************************974 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.4E-15	216	265	No hit	No description
SMART	SM00338	2.3E-9	218	269	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.702	220	265	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.8E-13	222	265	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.44E-11	222	265	No hit	No description
CDD	cd14707	2.31E-20	222	267	No hit	No description
PROSITE pattern	PS00036	0	225	240	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence Send to blast
MGIQTMGSQG GGGGGGQQSQ FQPLSRQSSL YSLTPDEVQN QLGDLGKPLS SMNLDELLKN 60 VWTAETNQAM GMDVANAASA GQLASASALQ RQASLTLIRA LSKKTVDDVW IDIQQGQKNS 120 DEEKKVQERQ LQRQASLTLI RALSKKTVDE VWTDIQQGQK NSDEEKKVQE RQPTLGEMTL 180 EDFLVKAGVV AEASSDMQNV DTQTPGRKRV APGDIIEKTV ERRQKRMIKN RESAARSRAR 240 KQAYTNELEN KVSRLEEENE RLKKQKVKSL HLFL

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010247606.1	1e-126	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Swissprot	Q9LES3	3e-57	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A1U7Z971	1e-125	A0A1U7Z971_NELNU; ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
STRING	XP_010247606.1	1e-126	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	6e-57	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]