 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
NNU_025009-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 282aa MW: 31453.5 Da PI: 7.6101 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| NNU_025009-RA | genome | CAS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.7 | 4.6e-19 | 137 | 191 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq Le+ F+++++++ ++++ LAk+l+L rqV vWFqNrRa+ k
NNU_025009-RA 137 RKKLRLTKEQSALLEDSFKEHSTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTK 191
788899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 125.8 | 1.9e-40 | 137 | 226 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+kk+rl+keq++lLE+sF+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +l
NNU_025009-RA 137 RKKLRLTKEQSALLEDSFKEHSTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELK-AL 226
69*************************************************************************************9.55 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009735 | Biological Process | response to cytokinin |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MGFEEDLCNT GLGLGLGCEG KPAETRPRST DHRRNKPCLN FDNLFLSSST TSMAITSDEP 60
SLTLSLSDEK YQAVKIDVNK ACDNSATDVC RQTSPHSGIS SFSNASVKKE RDLGNEELEV 120
EKVSSRASDE DEEGSARKKL RLTKEQSALL EDSFKEHSTL NPKQKQALAK QLNLRPRQVE 180
VWFQNRRART KLKQTEVDCE FLKKCCETLT DENRRLQKEL QELKALKLAQ PLYMQLPAAT 240
LTMCPSCERI GGITSDGSTK TSFAMAPKPH FFNPFTHPSA AC
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 185 | 193 | RRARTKLKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
