PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_022527-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bZIP
Protein Properties Length: 274aa    MW: 29685.3 Da    PI: 6.827
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_022527-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_157.23.6e-18211256348
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                    + +r+rr++kNRe+A rsR+RK+a++ eLe  v++Le+eN +L ke
  NNU_022527-RA 211 AQQRQRRMIKNRESAARSRERKQAYTVELESLVAQLEEENARLLKE 256
                    679***************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-12209274IPR004827Basic-leucine zipper domain
PfamPF001702.6E-14211256IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.944211256IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.88E-12213259No hitNo description
CDDcd147073.61E-21213257No hitNo description
Gene3DG3DSA:1.20.5.1709.6E-17214257No hitNo description
PROSITE patternPS000360216231IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MASSKVMASS GSANSDLARQ PSIYSRTVPE LQNGQKKKFG GSMNMDELLR NMYGDNPAAE  60
MIPPAGSGSG EGQANGAAGM SSLATQGSFT LPKSHKPVDE VWKEIAASGG DRKIRAVEEG  120
QYFKDPAIEQ MTLEDFLAKA GAVREEDVRI PQVSGAGQGV YPVDPLLANR FPQQQLEGSI  180
AGFGNGVEGG AAVGVGRGKR RIVEEPIDKA AQQRQRRMIK NRESAARSRE RKQAYTVELE  240
SLVAQLEEEN ARLLKEQTWD FEGMIVHLTQ HVAR
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010241694.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X4
SwissprotP427773e-35GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A1U7YV140.0A0A1U7YV14_NELNU; ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X4
STRINGXP_010241690.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.11e-29G-box binding factor 4