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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
NNU_021638-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
|
| Family |
HSF |
| Protein Properties |
Length: 364aa MW: 41692.7 Da PI: 4.7497 |
| Description |
HSF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| NNU_021638-RA | genome | CAS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HSF_DNA-bind | 114.6 | 6.4e-36 | 41 | 132 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97
Fl+k+y++++d+++++++sw++ g+s++v+d+++f+ ++Lp+yFkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F +g+k+ll++i
NNU_021638-RA 41 FLTKIYDMVDDPSTDDIVSWNRGGKSLIVWDPHSFSMNLLPRYFKHNNFSSFVRQLNTYGFRKIDPDK---------WEFANEGFLRGHKHLLKNI 127
9****************************************************************999.........******************* PP
XXXXX CS
HSF_DNA-bind 98 krkks 102
kr+k+
NNU_021638-RA 128 KRRKT 132
***86 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MNPPGPVKEE FPEASSSYTA DQFMAPPQPM EGLNEIGPPP FLTKIYDMVD DPSTDDIVSW 60
NRGGKSLIVW DPHSFSMNLL PRYFKHNNFS SFVRQLNTYG FRKIDPDKWE FANEGFLRGH 120
KHLLKNIKRR KTLSQPPFLQ QALGHCVEVG RFGLDGEIDR LRRDKQALIF ELVKLRQQQQ 180
STRAQLQSME QRLQGAELKQ KQMVTFLARA LRNPTFIQQL VQQNEKRREL EEAISKKRRR 240
PIDQGPSDVH VAEAIQSGEE ENPIKVEAQE LGDLYGYEVS ELETLALEMQ GLSQAGKEPI 300
EEQEEQEEEL ESRSKALDNG FWEELFSESF PDESGTQGQG AETRENEDIN VLADRLGYLG 360
SSPK
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 2ldu_A | 1e-25 | 39 | 132 | 18 | 122 | Heat shock factor protein 1 |
| 5d5u_B | 1e-25 | 39 | 132 | 27 | 131 | Heat shock factor protein 1 |
| 5d5v_B | 1e-25 | 39 | 132 | 27 | 131 | Heat shock factor protein 1 |
| 5d5v_D | 1e-25 | 39 | 132 | 27 | 131 | Heat shock factor protein 1 |
| 5hdg_A | 1e-25 | 39 | 132 | 8 | 112 | Heat shock factor protein 1 |
| 5hdn_A | 1e-25 | 39 | 132 | 8 | 112 | Heat shock factor protein 1 |
| 5hdn_B | 1e-25 | 39 | 132 | 8 | 112 | Heat shock factor protein 1 |
| 5hdn_C | 1e-25 | 39 | 132 | 8 | 112 | Heat shock factor protein 1 |
| 5hdn_D | 1e-25 | 39 | 132 | 8 | 112 | Heat shock factor protein 1 |
| Search in ModeBase |
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 123 | 129 | LKNIKRR |
| 2 | 225 | 239 | KRRELEEAISKKRRR |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By heat stress. {ECO:0000269|PubMed:18064488}. |
