PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_018587-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bZIP
Protein Properties Length: 457aa    MW: 48898 Da    PI: 5.0037
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_018587-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.52.2e-16235291359
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                    ++kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L  eN++L k+l  +++++ + 
  NNU_018587-RA 235 DVKRVRRMLSNRESARRSRRRKQAHMNELETQVSQLRVENSSLLKRLTDISQKYNEA 291
                    689*****************************************9999999988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.6E-21233297IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.6E-13233289No hitNo description
PROSITE profilePS5021711.737235290IPR004827Basic-leucine zipper domain
PfamPF001703.7E-14236289IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-12236288No hitNo description
CDDcd147026.76E-7238289No hitNo description
PROSITE patternPS000360240255IPR004827Basic-leucine zipper domain
PfamPF124982.6E-42304427IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    Send to blast
MDRVFSVGDI SDQFWPPPPV ASPPPPAHSS TAQQGEDFKM NRSSSEWAFQ RFLQEASSVA  60
ATSPPSATAA SSVPPPFSSA KTSERPAVGG DDEVVEIEKS QPPPTLSDPS PSVPIDSEEY  120
QAYLKSRLNL ACAAVALSRA SSAKPQDCAL LAEGASQASD ASQLGSQAPG IGPGYGLPKA  180
QDKAGGPAGI SVSPAMQKKS SAQTMPTTSG SSREQSDDDE IEGETEITEN MDPADVKRVR  240
RMLSNRESAR RSRRRKQAHM NELETQVSQL RVENSSLLKR LTDISQKYNE AAVDNRVLKA  300
DVETLRAKVK MAEDTVKRVT GFNPFLQAMS ADIGNIAMAF SGSPSDASPD AAVPVQDDPN  360
QHFYQPSPSA PTGTPHDQRL NNGLPDVPPV APGDDVQNVN GGTKMVRTSS MQRVASLEHL  420
QKRIRGSTSP YGPVQWDGGW DLENQHAVES SNKQNQI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1249256RRSRRRKQ
2251256SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010274216.10.0PREDICTED: light-inducible protein CPRF2 isoform X1
SwissprotQ990901e-136CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A1U8B0R00.0A0A1U8B0R0_NELNU; light-inducible protein CPRF2 isoform X1
STRINGXP_010274216.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.22e-64bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]