 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
NNU_017657-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
|
| Family |
MYB |
| Protein Properties |
Length: 315aa MW: 34702.9 Da PI: 5.4427 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| NNU_017657-RA | genome | CAS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 57.4 | 3.4e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEde+lv+++k+ G g+W++ +++ g+ R++k+c++rw +yl
NNU_017657-RA 14 KGPWTPEEDEILVEYIKKNGHGSWRSLPNHAGLFRCGKSCRLRWTNYL 61
79********************************************97 PP
|
| 2 | Myb_DNA-binding | 52.1 | 1.5e-16 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg++T++E++++++++ lG++ W++Ia+ ++ gRt++++k++w++
NNU_017657-RA 67 RGPFTPDEEKIIIQLHGILGNR-WAAIASQLP-GRTDNEIKNFWNT 110
89********************.*********.***********98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MGRAPCCDKQ GLKKGPWTPE EDEILVEYIK KNGHGSWRSL PNHAGLFRCG KSCRLRWTNY 60
LRPDIKRGPF TPDEEKIIIQ LHGILGNRWA AIASQLPGRT DNEIKNFWNT QLKKRLLCMG 120
LDPQTHTPSF PSCGPVATPS TSPSTRHMAQ WESARLEAEA RLSRESLLSN LQLSSTKAEV 180
DYFLRIWNSE VGESFRRLSG PDSTACQSPI SQVSSSTKWG SGSGLTTEVA PAMTGRLTTD 240
QPEEVECKNS KGGVDDLAAG SDCSISNEVN DSSDTSLQLL LDFPASDDMG FFQGQMDNFS 300
LLPNLLDECS FNSAP
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that may play a role in flower development by repressing ANT (PubMed:19232308). Regulates the transition of meristem identity from vegetative growth to flowering. Acts downstream of LFY and upstream of AP1. Directly activates AP1 to promote floral fate. Together with LFY and AP1 may constitute a regulatory network that contributes to an abrupt and robust meristem identity transition (PubMed:21750030). {ECO:0000269|PubMed:19232308, ECO:0000269|PubMed:21750030}. |
