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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
NNU_012343-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
|
| Family |
Trihelix |
| Protein Properties |
Length: 304aa MW: 36019.9 Da PI: 8.5917 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| NNU_012343-RA | genome | CAS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 78 | 1.4e-24 | 63 | 145 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W+ qe+++ + +r e+++++ ++k++k lWe vs k++e+g++rs+ qCk+kw+nl +ryk ++++e + ++++p++++l+
NNU_012343-RA 63 QWSLQETKEFLSIRAELDRTFMETKRNKLLWEVVSTKLKEKGYNRSADQCKCKWKNLVTRYKGCETIEPES---MRQQFPFYNELQ 145
7********************************************************************84...45689*****98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 304 aa
Download sequence Send
to blast |
LSLSLSRVRV LYLGTGRDDI SLFSLSPHIY SFSLLLRTLS PLCVMEGHHL ITVNVDTADR 60
FPQWSLQETK EFLSIRAELD RTFMETKRNK LLWEVVSTKL KEKGYNRSAD QCKCKWKNLV 120
TRYKGCETIE PESMRQQFPF YNELQAIFTA RMQRMLWQEA EGVVSSTNLK KKTGRLSSDD 180
DDDESYEDKD SGRKKKKSRS NNSTGTGSSS SANNNLQEIL EEFMRQQLQM EVQWREAVEA 240
REEQRRLKEM EWREAMEALE KERLLMDRRW REIEEQRRLR EEARAEKRDA LITALLNKLR 300
REDM
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that may play a role in the induction of CAM4 in response to pathogen and salt. {ECO:0000269|PubMed:15310827}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salt and infection with the bacterial pathogen P.syringae pv tomato. {ECO:0000269|PubMed:15310827}. |
