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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
NNU_012069-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
|
| Family |
NAC |
| Protein Properties |
Length: 372aa MW: 43101.4 Da PI: 7.2489 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| NNU_012069-RA | genome | CAS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 181.3 | 2.4e-56 | 22 | 151 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
+ppGfrFhPtdeelv++yL+kkv+++k++l +vike+d+yk+ePwdL++ k+ + e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++
NNU_012069-RA 22 VPPGFRFHPTDEELVDYYLRKKVASRKIDL-DVIKEIDLYKIEPWDLQEkcKIGNeEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIY 116
69****************************.9***************952444332555************************************* PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrle 129
s k++l+g++ktLvfykgrap+g+k+dW+mheyrle
NNU_012069-RA 117 S-KHNLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 151
*.899*****************************85 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0048759 | Biological Process | xylem vessel member cell differentiation |
| GO:1901348 | Biological Process | positive regulation of secondary cell wall biogenesis |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 372 aa
Download sequence Send
to blast |
MDYKAVYIPV PCRENMNTFS HVPPGFRFHP TDEELVDYYL RKKVASRKID LDVIKEIDLY 60
KIEPWDLQEK CKIGNEEQNE WYFFSHKDKK YPTGTRTNRA TTAGFWKATG RDKAIYSKHN 120
LIGMRKTLVF YKGRAPNGQK SDWIMHEYRL ETNENGTPQA KGWVVCRVFK KRITTIRKVS 180
DESSCWYDEQ VSFMPDLDSP KRIVQPADMA YHHPYACKQE LGLQYHMPHE AFLQLPQLES 240
PKLPHSAASV SCNSVIAYGL DINNPGSTLQ SSLTQEEQMQ QNHHQHNMNS LYNSNNNEQA 300
VDQVTDWRVL DKFVASQLSH EDASKETNYS NAAAVFHVSD HMNILVRQPN KQELVPEYAS 360
TSTSSCQIDL WK
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-51 | 22 | 172 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-51 | 22 | 172 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-51 | 22 | 172 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-51 | 22 | 172 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-51 | 22 | 172 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 1e-51 | 22 | 172 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 1e-51 | 22 | 172 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 1e-51 | 22 | 172 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 1e-51 | 22 | 172 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 1e-51 | 22 | 172 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 1e-51 | 22 | 172 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 1e-51 | 22 | 172 | 20 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 1e-51 | 22 | 172 | 17 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 1e-51 | 22 | 172 | 17 | 166 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', in the promoter of target genes (By similarity). Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE). Triggers thickening of secondary walls (PubMed:16103214, PubMed:25148240). {ECO:0000250|UniProtKB:Q9LVA1, ECO:0000269|PubMed:16103214, ECO:0000269|PubMed:25148240}. |
