 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
NNU_011942-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
|
| Family |
GATA |
| Protein Properties |
Length: 211aa MW: 23618 Da PI: 10.0201 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| NNU_011942-RA | genome | CAS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 54.7 | 1.4e-17 | 128 | 162 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +C + kTp+WR gp g+ktLCnaCG++y++ +l
NNU_011942-RA 128 CLHCLAEKTPQWRAGPLGPKTLCNACGVRYKSGRL 162
99*****************************9885 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 211 aa
Download sequence Send
to blast |
MLLVPPIQEL LEEDLEWLSN EDAFPAVEAF DDFLLGKLSK GPKQQSPVSV LENSSNSAIN 60
SSSSIMSCCG NLQVPVRARS KRRRRRRSGF SDISGQQWWW WWEPKNKSIG GGGAAKVTKT 120
TASMGRRCLH CLAEKTPQWR AGPLGPKTLC NACGVRYKSG RLVPEYRPAC SPTFSSELHS 180
NSHRKILEMR RQKQKELLLK SMDKGDDGNE A
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 78 | 86 | RSKRRRRRR |
| 2 | 80 | 85 | KRRRRR |
| 3 | 80 | 86 | KRRRRRR |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes. {ECO:0000269|PubMed:12139008}. |
