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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
NNU_008274-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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| Family |
YABBY |
| Protein Properties |
Length: 187aa MW: 21162 Da PI: 10.0199 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| NNU_008274-RA | genome | CAS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 154.4 | 1e-47 | 2 | 146 | 2 | 163 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvs 97
d + sse++Cyv+CnfCnt+lav +P + + +vtv+CGhC++l ++ ++ + ++l ++l++++ l++ ++++++s s
NNU_008274-RA 2 DYVPSSEHLCYVRCNFCNTVLAVGIPCKRFLDTVTVKCGHCSNLSFLST------RPPLQ---G---QRLDQQLGSQK--LQVFGNGYRKSQSSSS 83
67899*************************************9754222......22222...1...23444444444..4444444444444444 PP
YABBY 98 seklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163
s s+++++ +p+vp v++PPek+ r Psaynrf+keeiqrika+nP+i hreafs+aaknWa +
NNU_008274-RA 84 S---STSTQQTSPNVPYVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARY 146
4...56789999****************************************************86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 187 aa
Download sequence Send
to blast |
MDYVPSSEHL CYVRCNFCNT VLAVGIPCKR FLDTVTVKCG HCSNLSFLST RPPLQGQRLD 60
QQLGSQKLQV FGNGYRKSQS SSSSSTSTQQ TSPNVPYVVK PPEKKHRLPS AYNRFMKEEI 120
QRIKAANPEI PHREAFSTAA KNWARYIPYP PNGSISENNK SNERSITSLM ERIDNAPKKL 180
ESTEHKR
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| Functional Description ? help
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| Source |
Description |
| UniProt | Regulates carpel specification in flower development. Severe or intermediate mutation in DL causes complete or partial homeotic conversion of carpels into stamens without affecting the identities of other floral organs. Interacts antagonistically with class B genes and controls floral meristem determinacy. Regulates midrib formation in leaves probably by inducing cell proliferation in the central region of the leaf. {ECO:0000269|PubMed:14729915}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY854804 | 7e-49 | AY854804.1 Gossypium hirsutum isolate 1 CRABS CLAW mRNA, partial cds. |
| GenBank | AY854805 | 7e-49 | AY854805.1 Gossypium hirsutum isolate 2 CRABS CLAW mRNA, partial cds. |
