PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_008213-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bZIP
Protein Properties Length: 198aa    MW: 22885.6 Da    PI: 6.5112
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_008213-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.91.2e-1484142563
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                    +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L+++l++ ++  +++ +e+
  NNU_008213-RA  84 RKQRRMISNRESARRSRMRKQKHLDELWSQVIRLRTENRQLIDKLNHVSECHDQVLQEN 142
                    79*********************************************999888887765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.4E-1680144IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.81882145IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.44E-1384133No hitNo description
PfamPF001703.1E-1284142IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.3E-1384156No hitNo description
CDDcd147024.10E-1785136No hitNo description
PROSITE patternPS00036087102IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MQPGEVAGLR YLAPAEQSPY TAHFNFSTMQ SNIPLYHLSR LLRPLPSPQI PPPVHEFNPQ  60
SSCLSSNSTS DEADEQQLRI IDERKQRRMI SNRESARRSR MRKQKHLDEL WSQVIRLRTE  120
NRQLIDKLNH VSECHDQVLQ ENAQLREEAS ELRQMLGDLQ LDNPYTALRD PEEIPCNTAH  180
LRAESSNQSI TSSVDLLH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196103RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010257863.11e-144PREDICTED: basic leucine zipper 43-like
SwissprotQ9FMC23e-39BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A1U7ZZN91e-142A0A1U7ZZN9_NELNU; basic leucine zipper 43-like
STRINGXP_010257863.11e-143(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.12e-51basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]