PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Migut.O00853.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

TCP

Protein Properties

Length: 386aa MW: 43585.5 Da PI: 6.9555

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.O00853.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	137.9	8.6e-43	78	217	2	132
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg...... 88 +gkkdrhski T++g RdRR+Rls++ a++fFdLqd LG+dk+sktieWL+ ++k+aikel+ ++ +++++ +++++s s + Migut.O00853.1.p 78 TGKKDRHSKIRTAQGIRDRRMRLSLQAARKFFDLQDLLGYDKASKTIEWLFSKSKKAIKELMVNKDTNNNNNNNNNHSLSI-----Teqvglp 165 79************************************************************55555444333333333.....1233356 PP TCP 89 .........kaaksaa.kskksqksaasalnlakesrakarararertrekmri 132 k+ + + +kks+k+a+ + kesr+kararar rtrekm++ Migut.O00853.1.p 166 riieenfepKKLGFVPnIEKKSEKNAS--RPNTKESREKARARARCRTREKMMK 217 777777755444444434444555554..99999****************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	2.5E-39	78	217	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	34.767	80	138	IPR017887	Transcription factor TCP subgroup
PROSITE profile	PS51370	11.421	197	214	IPR017888	CYC/TB1, R domain

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence Send to blast
MFHSDNNNNI DNPIDPSSFE TPSSFRQIQN PISKQEADKY YSFDLSHFPL PLFDHHHELL 60 LPSNPRINHG GVGPKKRTGK KDRHSKIRTA QGIRDRRMRL SLQAARKFFD LQDLLGYDKA 120 SKTIEWLFSK SKKAIKELMV NKDTNNNNNN NNNHSLSITE QVGLPRIIEE NFEPKKLGFV 180 PNIEKKSEKN ASRPNTKESR EKARARARCR TREKMMKLGS CSNSPFDQES VCYNSQLAER 240 VSSGYGSDEY YPSNLLASQQ QLLADDVGTI EKMLENSNSS TTLSCAPVVS DAVSCFVDSD 300 SGFMGFFGSW DLLMNSDIMR LNFNNQLDAV TNEVHRLGDN PNSVDDSAAT LDFPLFHQEK 360 QNPNSVDDSA ATTLDFPLFH QEKHS*

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence Send to blast

MFHSDNNNNI DNPIDPSSFE TPSSFRQIQN PISKQEADKY YSFDLSHFPL PLFDHHHELL  60
LPSNPRINHG GVGPKKRTGK KDRHSKIRTA QGIRDRRMRL SLQAARKFFD LQDLLGYDKA  120
SKTIEWLFSK SKKAIKELMV NKDTNNNNNN NNNHSLSITE QVGLPRIIEE NFEPKKLGFV  180
PNIEKKSEKN ASRPNTKESR EKARARARCR TREKMMKLGS CSNSPFDQES VCYNSQLAER  240
VSSGYGSDEY YPSNLLASQQ QLLADDVGTI EKMLENSNSS TTLSCAPVVS DAVSCFVDSD  300
SGFMGFFGSW DLLMNSDIMR LNFNNQLDAV TNEVHRLGDN PNSVDDSAAT LDFPLFHQEK  360
QNPNSVDDSA ATTLDFPLFH QEKHS*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.O00853.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012846499.1	0.0	PREDICTED: uncharacterized protein LOC105966490
TrEMBL	A0A022QTD9	0.0	A0A022QTD9_ERYGU; Uncharacterized protein (Fragment)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2436	23	59

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	3e-27	TCP domain protein 12

Link Out ? help Back to Top
Phytozome	Migut.O00853.1.p