PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.O00779.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 181aa    MW: 19350.8 Da    PI: 9.9368
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.O00779.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.6e-055173123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      ++C++C++ F ++  L  H++ H
  Migut.O00779.1.p 51 FECQHCNRKFANSQALGGHQNAH 73
                      89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576676.68E-74778No hitNo description
Gene3DG3DSA:3.30.160.604.6E-54877IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015712.1755178IPR007087Zinc finger, C2H2
PROSITE patternPS0002805373IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MEENSSHGGG ACDPDVQDHR HSSLSSSSVM KIFGFPVMTN NGGKVENNKR FECQHCNRKF  60
ANSQALGGHQ NAHKKERQRA KRAHFAGVMM INPHGARSPA SSCTTPYMSP PRFFPPRVAE  120
NNAVGGGVPC VLSGVPLRYR SGFRAAVQPP RLAARGEVGP TKPTGYSTDV GDGLDVDLHL  180
*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.O00779.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842640.11e-132PREDICTED: zinc finger protein GIS-like
TrEMBLA0A022QYM48e-60A0A022QYM4_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA105631724
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58070.15e-13C2H2 family protein