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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.O00642.1.p |
Common Name | MIMGU_mgv1a020739mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
bHLH |
Protein Properties |
Length: 515aa MW: 57187.5 Da PI: 7.4724 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.O00642.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39.8 | 8.3e-13 | 361 | 407 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
+h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq
Migut.O00642.1.p 361 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITELQ 407
799***********************66......*****************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 515 aa
Download sequence Send
to blast |
MFMANNENLQ NKLSDLVERP NSSNFSWNYA IFWQLSKSKS GDLVLGWGDG CCREPLEEED 60 SEVARILNMR LEDESQQRMR KRVLQKLHMS SGGTDEDSYA FGLDKVTDAE MFFLASMYFS 120 FSRGEGGPGR CLGSGKHVWF SDTLKSSTDY CFRSFLAKLA GVRTVALIPT DIGVVELGSV 180 KCIPESLELG NLIRSSFSSL SGLVRAKKAA AVAVTTDKKD TQVVPKIFGQ DMYSNHTQFR 240 QKSVVGKVED SNRLPFTNTQ NGFLGWTQYG NVKPVNPPSN NLHELVNMAK KEYQFSNFQT 300 QKKPAQMQID FGGATSRTVI SRPRSAESEH SDVDEGVGIS GDNRSRKRGR KPANGREEAL 360 NHVEAERQRR EKLNQRFYAL RAVVPNISKM DKASLLGDAI AYITELQKKL KDMESEDERV 420 ITAPNTKIQD CAPRIDIETG CDEVTVKVIC PLDSHPVSRV VEAIKNVNAT IVDANFAAGS 480 EEVFHTFVVK SSQGSEQLTK DKLIEAFSGE SKSL*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 7e-28 | 355 | 416 | 2 | 63 | Transcription factor MYC2 |
5gnj_B | 7e-28 | 355 | 416 | 2 | 63 | Transcription factor MYC2 |
5gnj_E | 7e-28 | 355 | 416 | 2 | 63 | Transcription factor MYC2 |
5gnj_F | 7e-28 | 355 | 416 | 2 | 63 | Transcription factor MYC2 |
5gnj_G | 7e-28 | 355 | 416 | 2 | 63 | Transcription factor MYC2 |
5gnj_I | 7e-28 | 355 | 416 | 2 | 63 | Transcription factor MYC2 |
5gnj_M | 7e-28 | 355 | 416 | 2 | 63 | Transcription factor MYC2 |
5gnj_N | 7e-28 | 355 | 416 | 2 | 63 | Transcription factor MYC2 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that negatively regulates jasmonate (JA) signaling (PubMed:30610166). Negatively regulates JA-dependent response to wounding, JA-induced expression of defense genes, JA-dependent responses against herbivorous insects, and JA-dependent resistance against Botrytis cinerea infection (PubMed:30610166). Plays a positive role in resistance against the bacterial pathogen Pseudomonas syringae pv tomato DC3000 (PubMed:30610166). {ECO:0000269|PubMed:30610166}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by wounding, feeding with herbivorous insects, infection with the fungal pathogen Botrytis cinerea and infection with the bacterial pathogen Pseudomonas syringae pv tomato DC3000. {ECO:0000269|PubMed:30610166}. |