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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.O00536.1.p |
Common Name | LOC105949218, MIMGU_mgv1a010772mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
bHLH |
Protein Properties |
Length: 303aa MW: 33928.1 Da PI: 6.6047 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.O00536.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 44.2 | 3.5e-14 | 70 | 121 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+
Migut.O00536.1.p 70 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 121
79****************************...9******************995 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 303 aa
Download sequence Send
to blast |
MALETLSSSE LLNFIMYDST VSAPTPFESS EAAETRQSHP PPATETAVQG RKKRRRRPKV 60 CKNKEEAETQ RMTHIAVERN RRKQMNEHLA VLRSLMPESY VQRGDQASIV GGAIEFVKEL 120 EHILQSLEAK KFTLLEQQGN NNNTNINNNI NNNNSNNNNE DNYNPDQEIS DDNSSIKQVS 180 PFAQFFAYPQ FSCSNNQMGN KYTSQSKAAI ADIEVTLIET HANIRILSRR RLRQLSKIVA 240 SFHSVSLTIL HLNVTTLDLL VLYSISAKVE EGCQLSSADE IAGAVHHMLR IIEEEAILGC 300 QS*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 50 | 56 | RKKRRRR |
2 | 51 | 56 | KKRRRR |
3 | 70 | 81 | RMTHIAVERNRR |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KP257527 | 3e-74 | KP257527.1 Salvia miltiorrhiza clone 94 basic helix-loop-helix transcription factor mRNA, complete cds. |