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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.O00384.1.p |
Common Name | LOC105960798, MIMGU_mgv1a022433mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
MYB |
Protein Properties |
Length: 218aa MW: 25192.3 Da PI: 8.1917 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.O00384.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 61.3 | 2e-19 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+ Ed+ll+++v+q+G g+W++++++ g++R++k+c++rw +yl
Migut.O00384.1.p 13 KGPWTPVEDKLLIEYVTQFGEGRWSSVSKCTGLNRSGKSCRLRWVNYL 60
79********************************************97 PP
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2 | Myb_DNA-binding | 49 | 1.4e-15 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g T++E+ ++++++ +G++ W+tIar+++ gRt++++k++w+++
Migut.O00384.1.p 66 KGQLTPQEQGIIIELHSIWGNK-WSTIARYLP-GRTDNEIKNYWRTH 110
5778******************.*********.************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 218 aa
Download sequence Send
to blast |
MEKYGISEQG WRKGPWTPVE DKLLIEYVTQ FGEGRWSSVS KCTGLNRSGK SCRLRWVNYL 60 RPGLKKGQLT PQEQGIIIEL HSIWGNKWST IARYLPGRTD NEIKNYWRTH FKKRPSSSKP 120 FSEVIKKRNQ FNKQKKENNV DIESISPQLV AENDSKQEEV GPDCTGADVE EINDKMLPVF 180 NQDYYHGLSW SEFSTIPMDC CLWDGLWNFG DSTTNFN*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. {ECO:0000305}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid (SA). {ECO:0000269|PubMed:16463103}. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Nishida S,Kakei Y,Shimada Y,Fujiwara T
Genome-wide analysis of specific alterations in transcript structure and accumulation caused by nutrient deficiencies in Arabidopsis thaliana. Plant J., 2017. 91(4): p. 741-753 [PMID:28586097] - Imran QM, et al.
Transcriptome profile of NO-induced Arabidopsis transcription factor genes suggests their putative regulatory role in multiple biological processes. Sci Rep, 2018. 8(1): p. 771 [PMID:29335449]
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