PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.O00286.1.p

Common Name

LOC105975097, MIMGU_mgv1a011205mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

TCP

Protein Properties

Length: 290aa MW: 30947.3 Da PI: 9.6596

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.O00286.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	104.4	1.8e-32	38	166	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg..... 88 +kk + +++h+kv+gR+R +R+++ aa +F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ +++s ++s+s s++ Migut.O00286.1.p 38 AKKLPAKDRHSKVDGRGRHIRMPIIYAAGVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFStvSPSSTRNSSS--SISasldh 128 6999***********************************************************99999666454444444444..22233555 PP TCP 89 .....................................k 89 + Migut.O00286.1.p 129 ktlshslltpspfilgkrlrsdeddhhlhhhhqhlskD 166 66777777666666655444333333333333333330 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	4.8E-28	43	170	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	24.431	43	97	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence Send to blast
MSASATDGPI IDPSQRLQHP PHTNNPSPSP SPSTPLSAKK LPAKDRHSKV DGRGRHIRMP 60 IIYAAGVFQL TRELGHKSDG QTIEWLLRQA EPSIIAATGT GTTPATFSTV SPSSTRNSSS 120 SISASLDHKT LSHSLLTPSP FILGKRLRSD EDDHHLHHHH QHLSKDDAIS ASAAMGSALP 180 AGGFWALPTR SDFGQVWSFA APPHPEMVVA AAAASNNSHQ QQHQSHSASL RFLQQQQQQQ 240 QPFGMGEASA ARVGNYLPIA QVQGHHLNLL ASLSGPPSQS SDRREGDPN*

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00524	DAP	Transfer from AT5G23280	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.O00286.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012855725.1	0.0	PREDICTED: transcription factor TCP7
Swissprot	Q9FMX2	2e-76	TCP7_ARATH; Transcription factor TCP7
TrEMBL	A0A022Q2T6	0.0	A0A022Q2T6_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3951	22	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	4e-55	TCP family protein

Link Out ? help Back to Top
Phytozome	Migut.O00286.1.p
Entrez Gene	105975097