PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.O00255.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 364aa    MW: 41320.8 Da    PI: 5.3928
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.O00255.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.26e-161761147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r +WT+eE++++++a k++G   W+ I +++g ++t+ q++s+ qk+
  Migut.O00255.1.p 17 REKWTEEEHQKFLEALKLYGRA-WRQIEEHVG-TKTAIQIRSHAQKF 61
                      789*****************88.*********.************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.89E-161166IPR009057Homeodomain-like
PROSITE profilePS5129421.7551266IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.4E-91463IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-161564IPR006447Myb domain, plants
SMARTSM007174.2E-131664IPR001005SANT/Myb domain
PfamPF002492.1E-131760IPR001005SANT/Myb domain
CDDcd001671.02E-91962No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007623Biological Processcircadian rhythm
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0046686Biological Processresponse to cadmium ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MVAEAKVRKP YTITKQREKW TEEEHQKFLE ALKLYGRAWR QIEEHVGTKT AIQIRSHAQK  60
FFAKVARESC FDAEGSLDPI EIPPPRPKKK PLHPYPRKRV PHRAEVDECE NYSPTSVLSP  120
DKFESSNVSE IHKSRISPPS SCADNDALSS ADLFLAENKN ENENENENEN VASNMSCEDE  180
EGSHLPKKIS SASVQDIDSD VKFELCTQET ESCTRESYTT SIKLFGKTVV IRDTQKQSLE  240
ASNKLDSRDV SGFVYDNANY SPMEYKHDMP WYSWYTSPFY SSSACKKTDK EDFSDYPFEK  300
AIKDEELKTE GSLVSDGADS NGLFGYGNNK IGIGFVPYKR CLSERDDKSF LQGRDCQRAR  360
VCS*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00146DAPTransfer from AT1G18330Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.O00255.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855633.10.0PREDICTED: protein REVEILLE 7
TrEMBLA0A022Q4Z10.0A0A022Q4Z1_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74472127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18330.12e-38MYB_related family protein