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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Migut.N03227.1.p |
Common Name | LOC105959637, MIMGU_mgv1a007325mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
Trihelix |
Protein Properties |
Length: 412aa MW: 47722.6 Da PI: 7.0753 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.N03227.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 77.7 | 1.8e-24 | 117 | 213 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyf 82
+Wt+ +v++Li+a++++ e+ + + +kk++W++vsk+m+erg +sp+qC++k+++lnkryk+++e+ +++ ++e++++ +++
Migut.N03227.1.p 117 KWTDAMVRLLITAVSYISEEAAEYSgtskrkcanlQKKGKWKSVSKVMAERGHFVSPQQCEDKFNDLNKRYKRLNEILGRGtSCEVVENPSLL 209
7**************99999997544456777888**********************************************669****99999 PP
trihelix 83 dqle 86
+ ++
Migut.N03227.1.p 210 EVMD 213
9987 PP
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Protein Features
? help Back to Top |
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Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
Pfam | PF13837 | 1.9E-22 | 115 | 239 | No hit | No description |
Sequence ? help Back to Top |
Protein Sequence Length: 412 aa
Download sequence Send
to blast |
MEGDLSSRNL MQSNTSYIGF NSQVPMRVHH HQQQQQQHNN PHPKQGSSSS SMIYPTIHEK 60 FPLPIIGTIQ EDQPVSLLDY NKPNMPKSPS EDEEPSFSEE PTKGKKSSSS SPWQRVKWTD 120 AMVRLLITAV SYISEEAAEY SGTSKRKCAN LQKKGKWKSV SKVMAERGHF VSPQQCEDKF 180 NDLNKRYKRL NEILGRGTSC EVVENPSLLE VMDHISTKAK DEVRKILSSK HLHYEEMCSY 240 HNGNRLHLPP DPDLQHSLRL ALRNDEAEVK RHHSNEDNEE VDQEDNELVH DDRAYVVQGN 300 SAKKVKPCRG HEEFHHRGSS KSDKVVAFEG GTTKMNTVTA NSWNLQIEEQ RVHIEEQMLE 360 LEKERFKWQK FCQKKDRELE IMRIEIERMK LENERMALDL RRREMGIIDN N*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G21200.1 | 5e-90 | sequence-specific DNA binding transcription factors |