PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N03122.1.p
Common NameLOC105959550, MIMGU_mgv1a020470mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family SRS
Protein Properties Length: 347aa    MW: 37701.2 Da    PI: 7.3798
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N03122.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702215.89.8e-671232794154
            DUF702   4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaes 96 
                        ++sCqdCGnqakkdC+h+RCRtCCksrg+ C+thvkstWvpaa+rrer qq++++++++++s+ + +++++++l ++ +   + ++l +++ 
  Migut.N03122.1.p 123 DGISCQDCGNQAKKDCEHMRCRTCCKSRGYPCQTHVKSTWVPAARRRERLQQQQQLTTTTTNSSLQTDQQQQQQL-AAVRGGENPKRLREGDG 214
                       6789*********************************************88888887777666644444444443.34444444555555555 PP

            DUF702  97 kkeletss.......lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                       +     s        +P+e+ss+avfrcvrvs++dd+ee+laYqtav+igGhvfkGiLydqG+e+
  Migut.N03122.1.p 215 RAGAGGSGggfelghFPAELSSPAVFRCVRVSAMDDAEEHLAYQTAVNIGGHVFKGILYDQGPES 279
                       544444444555555************************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF051421.9E-62124278IPR007818Protein of unknown function DUF702
TIGRFAMsTIGR016232.9E-27126168IPR006510Zinc finger, lateral root primordium type 1
TIGRFAMsTIGR016248.5E-27229277IPR006511Lateral Root Primordium type 1, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048467Biological Processgynoecium development
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MSGFFSLSGK NHDNNQEQQD QHNQTAETGN NNSNNYNLFL LNKNEEIYSK GFEVWQQYYQ  60
LHHQRSHHQD VDFSIGPSSG GRRRSIGGGD EPGNYGSYNN NRSAAELGFR VMNHQGRGAV  120
GSDGISCQDC GNQAKKDCEH MRCRTCCKSR GYPCQTHVKS TWVPAARRRE RLQQQQQLTT  180
TTTNSSLQTD QQQQQQLAAV RGGENPKRLR EGDGRAGAGG SGGGFELGHF PAELSSPAVF  240
RCVRVSAMDD AEEHLAYQTA VNIGGHVFKG ILYDQGPESR YPGGAAGEGP SSAGLIGGGS  300
HQQSLDLITA TTSNTNLTML DPSIYPSSHQ LSGFMAGTQF FLPPRP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N03122.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012839127.10.0PREDICTED: protein SHI RELATED SEQUENCE 5-like
TrEMBLA0A022RAI10.0A0A022RAI1_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67824110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.12e-56SHI-related sequence 5