PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N02932.1.p
Common NameLOC105959384, MIMGU_mgv1a003672mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 571aa    MW: 64339.8 Da    PI: 4.4068
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N02932.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.15.9e-52151412128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                       ppGfrFhPtdeelv +yLkkk+ ++++ l +vi e+d+yk++P++Lp  +k+k+++++w+fFs+rd+ky++g r+nrat++gyWkatgkd+ +
  Migut.N02932.1.p  15 PPGFRFHPTDEELVLYYLKKKICRQRHLL-NVIGETDVYKWDPEELPdiSKLKTGDRQWFFFSPRDRKYPNGARSNRATRHGYWKATGKDRVI 106
                       9************************9766.99**************96559999*************************************** PP

               NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        + ++++vglkktLvfy+grap+ge+tdWvmhey++
  Migut.N02932.1.p 107 SC-NSRAVGLKKTLVFYRGRAPSGERTDWVMHEYTM 141
                       *9.999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-599164IPR003441NAC domain
PROSITE profilePS5100555.73214164IPR003441NAC domain
PfamPF023651.5E-2715140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0070301Biological Processcellular response to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    Send to blast
MKVDTNCFSE GNNFPPGFRF HPTDEELVLY YLKKKICRQR HLLNVIGETD VYKWDPEELP  60
DISKLKTGDR QWFFFSPRDR KYPNGARSNR ATRHGYWKAT GKDRVISCNS RAVGLKKTLV  120
FYRGRAPSGE RTDWVMHEYT MDEEELKRCR NAKEYYALYK VFKKSGPGPK NGEQYGAPFR  180
EEDWVDDDEP VKPAKEVVPI ENNAKPVDSQ NHSLFDDLER FLNQVADDEP VPNQPLGFDF  240
DYEEESRSTL VDHSSRGVDL TVFQRFTQQP SLHGSFDMTQ SGTTQLQLCE APEVSSSAPV  300
NNLQNIYVTE EDLLDDFLEM DDLNGGDLNN QNLDNQANFE NLQFNEFDGL TEFDLYEDAP  360
SFLCEVGPGH ISQPYMDNFE NGIMNPISSS QLNHLENTIT TEDYLLQQQY TNADGIINYQ  420
MWTDELNYSA VTPGQTNQGP SSTSGVLNQN QNNGFVNDYA GENENGGGKG DDGTESWFSS  480
ALWSFVESIP TTPASASESA LVNRAFERVS SFSRVRLNVR NTNAAAGNAT ANSRSLGNSR  540
NGFIFFLLSL FGILCAVLWV VIGPSVRLLG *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-481314114140Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00179DAPTransfer from AT1G34190Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N02932.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012838924.10.0PREDICTED: NAC domain-containing protein 17-like
TrEMBLA0A022R8F50.0A0A022R8F5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32122451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.11e-121NAC domain containing protein 17