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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.N02832.1.p |
Common Name | LOC105959311, MIMGU_mgv1a008594mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
bHLH |
Protein Properties |
Length: 369aa MW: 41535.9 Da PI: 5.0696 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.N02832.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 35.7 | 1.5e-11 | 201 | 244 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L
Migut.N02832.1.p 201 LMAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 244
589*********************66......****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 369 aa
Download sequence Send
to blast |
MEYHTNEELG FLEELLGLRE MEYNNINYGD QHFNNNNGGW SLDYNFADDN NFPAPASTLT 60 NTTANTCFQD YSLPPPPLID DHNHHHQILM NNCYTPFGED HKSPPPDQFA VVDSSSLDTQ 120 TVMPYCHVED YYSMSSILGG DDEDGALFGL IDEEAGAPFC KAEPVPEMPA FNMGFCAQTQ 180 QSETTRKNKV KKLGGQPSKN LMAERRRRKR LNDRLSMLRS VVPKISKMDR TSILGDTIDY 240 MKELLERINN LQQEMHLGSN QLSLMTIFKD VKPNEVLVRN SPKFEVEKRK NGERRIEMCC 300 GGKAGLLVST VNTIEALGLE IKQCVISCFH DFSLQASCSE ELKKRGIVDS EDIKQALLRN 360 AGYAGRCL*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 203 | 210 | ERRRRKRL |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Sharma N, et al.
NO FLOWERING IN SHORT DAY (NFL) is a bHLH transcription factor that promotes flowering specifically under short-day conditions in Arabidopsis. Development, 2016. 143(4): p. 682-90 [PMID:26758694] - Chen YS, et al.
Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis. Plant Mol. Biol., 2017. 93(3): p. 299-311 [PMID:27866313] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]
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