PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N02807.1.p
Common NameMIMGU_mgv1a025701mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family TALE
Protein Properties Length: 153aa    MW: 17567.7 Da    PI: 7.7089
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N02807.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.72.6e-10791142055
                       HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
          Homeobox  20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                       +k +yps++e+  LA+++gL+++q+ +WF N+R ++
  Migut.N02807.1.p  79 YKWPYPSESEKVALAESTGLDQKQINNWFINQRKRH 114
                       5679*****************************985 PP
2ELK37.64.5e-133455122
               ELK  1 ELKhqLlrKYsgyLgsLkqEFs 22
                      ELK++Ll+KYsgyL+sLkqE+s
  Migut.N02807.1.p 34 ELKNHLLKKYSGYLSSLKQELS 55
                      9*******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5121311.2433454IPR005539ELK domain
SMARTSM011881.0E-63455IPR005539ELK domain
PfamPF037892.2E-103455IPR005539ELK domain
PROSITE profilePS5007112.95754117IPR001356Homeobox domain
SuperFamilySSF466891.97E-2055130IPR009057Homeodomain-like
SMARTSM003892.8E-1356121IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.2E-2859120IPR009057Homeodomain-like
CDDcd000869.61E-1366118No hitNo description
PfamPF059202.6E-1774113IPR008422Homeobox KN domain
PROSITE patternPS00027092115IPR017970Homeobox, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
DKCEGVGSSE DDQDNNSGGE TGQPEIDPRA EDRELKNHLL KKYSGYLSSL KQELSKKKKK  60
GKLPKDARQK LLSWWELHYK WPYPSESEKV ALAESTGLDQ KQINNWFINQ RKRHWKPSED  120
MQFMVMDGLH PQSGALYMEG HYMGEGPYRL GP*
Functional Description ? help Back to Top
Source Description
UniProtAppears to be involved in meristem formation and in the regulation of leaf morphology. Misexpression makes the leaf more compound which is always associated with growth retardation and loss of apical dominance, resulting in dwarfed, bushy plants. Probably binds to the DNA sequence 5'-TGAC-3'.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N02807.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012838803.11e-108PREDICTED: homeotic protein knotted-1
SwissprotQ413307e-91KN1_SOLLC; Homeotic protein knotted-1
TrEMBLA0A022R7G51e-108A0A022R7G5_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49732333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08150.13e-73KNOTTED-like from Arabidopsis thaliana