PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.N02774.1.p | ||||||||
Common Name | LOC105958754, MIMGU_mgv1a025380mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 326aa MW: 36317.5 Da PI: 4.6021 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32 | 2.2e-10 | 254 | 294 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR++iN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq Migut.N02774.1.p 254 RKRREKINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 294 9******************97.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.066 | 244 | 293 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.88E-14 | 247 | 310 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.3E-13 | 249 | 307 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.3E-11 | 250 | 299 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.07E-11 | 253 | 298 | No hit | No description |
Pfam | PF00010 | 1.1E-7 | 254 | 294 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence Send to blast |
MESIGAFLDQ EWESLSKMFS FEEDSDFLNS CSSLFGELPS SDFLSGDGNL SVLPSDVHHG 60 TNNLDINDAN YFYYVSQESV VSQSESNEII NHFEMSPSMD FVATMNDSSA SMVGPVFTDD 120 DVMQEFRQLK ADILNEQLCV NNADNSSCKR KFETELLPQD ISPKKKPRIS RNAHKKTRNG 180 PQSTKKNKKA ICIDDEEVNI IKGGENNGQS SSTCTSEEDD SNVGAISESK KSASNGKAKV 240 GKGTATDPQS LYARKRREKI NERLRILQNL VPNGTKVDIS TMLEEAVQYV KFLQLQIKLL 300 SSDEMWMYAP IAYNGMDMGL YQRIN* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 253 | 258 | RKRREK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.N02774.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012838212.1 | 0.0 | PREDICTED: transcription factor bHLH139-like | ||||
TrEMBL | A0A022R8Q5 | 0.0 | A0A022R8Q5_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA639 | 22 | 101 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14760.1 | 1e-50 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.N02774.1.p |
Entrez Gene | 105958754 |