PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N02542.1.p
Common NameLOC105958867, MIMGU_mgv1a008574mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 370aa    MW: 40574.9 Da    PI: 8.1694
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N02542.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.82.1e-06185207123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       + C+ C+k F+r  nL+ H+r H
  Migut.N02542.1.p 185 HYCQVCSKGFKRDANLRMHMRAH 207
                       68*******************99 PP
2zf-C2H210.70.0017287310123
                       EEETTTT.EEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCg.ksFsrksnLkrHirtH 23 
                       y+C+ C+ k Fs  s+L++H + +
  Migut.N02542.1.p 287 YVCKRCNrKNFSVLSDLRTHEKHC 310
                       9*******************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.23E-5183210No hitNo description
Gene3DG3DSA:3.30.160.607.3E-6185211IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003550.014185207IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.926185212IPR007087Zinc finger, C2H2
PROSITE patternPS000280187207IPR007087Zinc finger, C2H2
SMARTSM0035574249282IPR015880Zinc finger, C2H2-like
SMARTSM0035535287309IPR015880Zinc finger, C2H2-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MNTVESSCYP NMYGVVSDNQ EVISSSNPNS FLYNLSILKD KVHQVQSLAS IFMSPDNLPP  60
SDSTAAVAIP TMGTLIQEII VTASSMMFSC QQMSLIYGAA ADGGDPAMER EEPSAAFFSD  120
HWYVEGYSNI GSSNSNFEEG NNCGRELTPK RERNEGMTRG VISPAKDNYD IIELEAADLL  180
AKYTHYCQVC SKGFKRDANL RMHMRAHGDE YKSAAALSNP LKNSTPAAAG GEPPCDISAA  240
AAAPQQRKYS CPQEGCRWNK KHAKFQPLKS MICVKNHYKR SHCPKMYVCK RCNRKNFSVL  300
SDLRTHEKHC GDLKWQCSCG TTFSRKDKLM GHVALFVGHA PATVNSLVKM GNGGAASNSS  360
QMQLDNSFR*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. Together with STOP1, plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation. {ECO:0000269|PubMed:23935008}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00522DAPTransfer from AT5G22890Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N02542.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012838325.10.0PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1
SwissprotQ0WT241e-111STOP2_ARATH; Protein SENSITIVE TO PROTON RHIZOTOXICITY 2
TrEMBLA0A022R7A20.0A0A022R7A2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112652225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22890.11e-111C2H2 family protein