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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.N02478.1.p |
Common Name | MIMGU_mgv1a022798mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
NAC |
Protein Properties |
Length: 193aa MW: 22022.8 Da PI: 9.8314 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.N02478.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 142.7 | 2.2e-44 | 4 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWka 85
+ppGfrF Pt+eelv++yL++k+e+++ +++++vi+ +diy++ePw+Lpk ++++ ++w+fF++r++++ +g +++r+t +gyWka
Migut.N02478.1.p 4 MPPGFRFYPTEEELVSFYLHNKLENNNnnnnNSINRVIPLLDIYNLEPWQLPKhcgeLCHGDPEQWFFFAPRHEREVRGGKPRRTTGTGYWKA 96
79**********************99966655666689999***********645543344677***************************** PP
NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
tg+ v+s+ g+++g+kk++vfykg+ap+g+kt+W m+eyr+
Migut.N02478.1.p 97 TGSPSYVHSSAGKVIGVKKSMVFYKGKAPTGTKTKWKMNEYRA 139
*****************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 193 aa
Download sequence Send
to blast |
MEEMPPGFRF YPTEEELVSF YLHNKLENNN NNNNNSINRV IPLLDIYNLE PWQLPKHCGE 60 LCHGDPEQWF FFAPRHEREV RGGKPRRTTG TGYWKATGSP SYVHSSAGKV IGVKKSMVFY 120 KGKAPTGTKT KWKMNEYRAI KQDGPTSTPK LRHELSLCRV YVVSGSRRAF DRRPTAAAET 180 SSRVNSQENN DD*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3swm_A | 5e-37 | 4 | 161 | 20 | 166 | NAC domain-containing protein 19 |
3swm_B | 5e-37 | 4 | 161 | 20 | 166 | NAC domain-containing protein 19 |
3swm_C | 5e-37 | 4 | 161 | 20 | 166 | NAC domain-containing protein 19 |
3swm_D | 5e-37 | 4 | 161 | 20 | 166 | NAC domain-containing protein 19 |
3swp_A | 5e-37 | 4 | 161 | 20 | 166 | NAC domain-containing protein 19 |
3swp_B | 5e-37 | 4 | 161 | 20 | 166 | NAC domain-containing protein 19 |
3swp_C | 5e-37 | 4 | 161 | 20 | 166 | NAC domain-containing protein 19 |
3swp_D | 5e-37 | 4 | 161 | 20 | 166 | NAC domain-containing protein 19 |
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