PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.N02324.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | NAC | ||||||||
Protein Properties | Length: 181aa MW: 21404 Da PI: 3.6456 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 48.6 | 2.7e-15 | 6 | 97 | 1 | 77 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk................kvkaeekewyfFskrdkkyatgkrknra 77 lppG+rF+Ptdeel+v+yLk+kv++++++ + i++vd yk +P++L ++ ++++ fF +++++ + + + r+ Migut.N02324.1.p 6 LPPGIRFKPTDEELIVFYLKPKVDEQPVPP-SEINTVDFYKNDPQTLADdffpeddvyygqyqdeGFQPQQQQDGFFQPQQQQDEGFQPQPRQ 97 79*************************999.66**************7446777777666544432223445556777776666554545555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.97E-16 | 2 | 64 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 12.503 | 6 | 164 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.0E-5 | 7 | 88 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence Send to blast |
MEFPELPPGI RFKPTDEELI VFYLKPKVDE QPVPPSEINT VDFYKNDPQT LADDFFPEDD 60 VYYGQYQDEG FQPQQQQDGF FQPQQQQDEG FQPQPRQQDE GFQPQPRQQD EGFQPQPRQQ 120 DEGFQQQPRQ QDEGFQPQPR QQDEDEGFQP RQQQDGLFCF FQPQQDEESE YIASLLQNFV 180 * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.N02324.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012844652.1 | 1e-115 | PREDICTED: mediator of RNA polymerase II transcription subunit 15-like isoform X2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 2e-13 | NAC domain containing protein 25 |
Link Out ? help Back to Top | |
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Phytozome | Migut.N02324.1.p |