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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Migut.N02248.4.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
bHLH |
Protein Properties |
Length: 484aa MW: 53372.3 Da PI: 7.6075 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.N02248.4.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 50.7 | 3.3e-16 | 300 | 347 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+ hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq
Migut.N02248.4.p 300 QVHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 347
57*************************8.....6******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006783 | Biological Process | heme biosynthetic process |
GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
GO:0009959 | Biological Process | negative gravitropism |
GO:0010100 | Biological Process | negative regulation of photomorphogenesis |
GO:0010161 | Biological Process | red light signaling pathway |
GO:0010187 | Biological Process | negative regulation of seed germination |
GO:0015995 | Biological Process | chlorophyll biosynthetic process |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0010313 | Molecular Function | phytochrome binding |
GO:0042802 | Molecular Function | identical protein binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 484 aa
Download sequence Send
to blast |
MNHRVPNFQD MEHNYSIPPR KKPAATAGEE EIMELLWQNG QVVVQTQNQR LPKKTGGGGG 60 GVMIPAEREM RPAGGDEQQQ QHLFMQEDEM SAWLQYPLDD SSFDRDLYAD LLFPAPPPVN 120 AVPQPPGAIR PPPDNPPRLQ NFMHFSRLPI RPRTETTTTT NKTSVITAAR EATVVESNET 180 PAAAARQSSF SHRIVDSSRP QQVIVESGTA PARELAAAGT CEVSVTSSPG GSRASFSGSG 240 EQQQRPPPPP PPPLNNRKRK AREADENECQ SEDIEFEVAG GEAKKQVCGS ASTKRSRAAQ 300 VHNLSERRRR DRINEKMKAL QELIPRCNKS DKASMLDEAI EYLKSLQVQV QMMSMGCGMV 360 PMMYPGMQQY MPTMGMGMGM GMGMGMEMGM NRPPMVQYPS MPMPNPRFPM PGFHQPCNQT 420 DPIPNPAVPH NQNQAHMPNF VDPYQQFHGL HPSQLPQNQG VARPGTNKPS TSRDIGNPDN 480 RQG*
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