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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Migut.N02248.3.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
bHLH |
Protein Properties |
Length: 474aa MW: 52132.9 Da PI: 7.5851 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.N02248.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 50.7 | 3.2e-16 | 290 | 337 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+ hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq
Migut.N02248.3.p 290 QVHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 337
57*************************8.....6******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006783 | Biological Process | heme biosynthetic process |
GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
GO:0009959 | Biological Process | negative gravitropism |
GO:0010100 | Biological Process | negative regulation of photomorphogenesis |
GO:0010161 | Biological Process | red light signaling pathway |
GO:0010187 | Biological Process | negative regulation of seed germination |
GO:0015995 | Biological Process | chlorophyll biosynthetic process |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0010313 | Molecular Function | phytochrome binding |
GO:0042802 | Molecular Function | identical protein binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 474 aa
Download sequence Send
to blast |
MEHNYSIPPR KKPAATAGEE EIMELLWQNG QVVVQTQNQR LPKKTGGGGG GVMIPAEREM 60 RPAGGDEQQQ QHLFMQEDEM SAWLQYPLDD SSFDRDLYAD LLFPAPPPVN AVPQPPGAIR 120 PPPDNPPRLQ NFMHFSRLPI RPRTETTTTT NKTSVITAAR EATVVESNET PAAAARQSSF 180 SHRIVDSSRP QQVIVESGTA PARELAAAGT CEVSVTSSPG GSRASFSGSG EQQQRPPPPP 240 PPPLNNRKRK AREADENECQ SEDIEFEVAG GEAKKQVCGS ASTKRSRAAQ VHNLSERRRR 300 DRINEKMKAL QELIPRCNKS DKASMLDEAI EYLKSLQVQV QMMSMGCGMV PMMYPGMQQY 360 MPTMGMGMGM GMGMGMEMGM NRPPMVQYPS MPMPNPRFPM PGFHQPCNQT DPIPNPAVPH 420 NQNQAHMPNF VDPYQQFHGL HPSQLPQNQG VARPGTNKPS TSRDIGNPDN RQG*
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