PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.N01778.1.p | ||||||||
Common Name | MIMGU_mgv1a020754mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 308aa MW: 32879.4 Da PI: 7.6352 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 47.4 | 3.4e-15 | 169 | 216 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h++ E++RR++iN++++ L++l+P++ K + a+iL ++eYIk+Lq Migut.N01778.1.p 169 AMHSQSEKKRREKINQRMQILQKLVPNC-----NKIDRASILDDVIEYIKQLQ 216 579************************8.....6******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.83E-18 | 164 | 224 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 16.768 | 166 | 215 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.2E-17 | 166 | 222 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.3E-12 | 170 | 216 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.63E-15 | 171 | 220 | No hit | No description |
SMART | SM00353 | 1.1E-15 | 172 | 221 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence Send to blast |
MSHCFPAGWD IHGGSSAPTP PPPGLTTPPI LPPDVPLSWE EPRAAGTLES VVNQAIVTSH 60 PRLRESGDGG NHHHHQPAAV ITDAALVPAC DTTTNYSTIR SYNINNQQNS KHAVPEFFPE 120 TPHSGAAAAA STTHGGAGFC SCKTNRDDGG KKGEYGKPLN SKGKSRAAAM HSQSEKKRRE 180 KINQRMQILQ KLVPNCNKID RASILDDVIE YIKQLQSQVE MMCLMNMPSL VMLPLGIQPH 240 HLQISMVDTG LGMSSGSGSG TGMCMGMGRL VDMDTIGRAA TMPPWPPAIT TFMPPMAASS 300 DFQHSPF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 175 | 180 | KKRREK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.N01778.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012831362.1 | 1e-137 | PREDICTED: transcription factor UNE10-like | ||||
TrEMBL | A0A022RRJ8 | 0.0 | A0A022RRJ8_ERYGU; Uncharacterized protein | ||||
STRING | Migut.N01778.1.p | 0.0 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00050.1 | 9e-29 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.N01778.1.p |