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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Migut.N01727.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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| Family |
Trihelix |
| Protein Properties |
Length: 351aa MW: 38694.2 Da PI: 9.2959 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.N01727.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 62.7 | 8.3e-20 | 44 | 134 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkr..tsessstcpyfdqle 86
+W+ +e+ aLi+a+r+++ +lrrg+l++++W+ev++ + ++++qC++k+e+l+kry+++ +++ + + +s++++f+ ++
Migut.N01727.1.p 44 CWSPDETVALIDAYRDKWYSLRRGNLRANHWQEVADDVasrCPASPPKTAVQCRHKMEKLRKRYRAEIQRSAAHggVRRYTSSWVHFHIMH 134
7*************************************5432234489******************99999888556888999*****998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MSTTLSPSSH DDDHHHHHIP TATLALPSSA AATSSASRRL PPPCWSPDET VALIDAYRDK 60
WYSLRRGNLR ANHWQEVADD VASRCPASPP KTAVQCRHKM EKLRKRYRAE IQRSAAHGGV 120
RRYTSSWVHF HIMHAMEKGP NPTPPSSDDD DEEEENDHRN SIKRINDLYN HNQKGGFAAP 180
DPPETNGSTS GFRIKIPGRV TSAGGGVPTV AKVYSKFDEM GSGGGPNPNY PNPRFTNYTT 240
GVNGAAASSK VSRDGFVGKR AAAEPSSKNK ADSGVGELVS AIQGLGEGFM RMEKVKMDMV 300
RQIEEMRMEM ELKRTEMILE SEQRIVEAFA KSISERNTKR AKRNSNTPEC *
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