PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01652.1.p
Common NameMIMGU_mgv1a010598mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 308aa    MW: 34533.7 Da    PI: 9.3854
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01652.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.40.00098244263323
                       ETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                       C+ Cgk F  ++ L+ H++++
  Migut.N01652.1.p 244 CSQCGKQF-KPEKLHAHMKSC 263
                       ********.**********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF061362.3E-4013168IPR010369Protein of unknown function DUF966
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MEAQSDAEVR RLHVVYFLSR KGFVEHPHLI RIHQLSKNGV RLRDIKRWLG ELRGEDMPES  60
FSWSYKRKYK TGYVWQDLLD DDLVTPISDN EFVLKGSEIS STTNNNTESS ETTSIYVPTK  120
PSSEIEESSI DSETSTLTDE YSDKIMQEAK SSIFGSTFVT KEKNEKTTNK VKVADSSSNK  180
PNCTSNIFRN LITCGAVDTN DSALKVKNKS KIRDGAKDSS KKKVHFSEQM VSRPSYKPLN  240
GPNCSQCGKQ FKPEKLHAHM KSCKGNKALA KASSNPSIYA TNSDNISQIS TKLFKNEDSV  300
SSYLLTR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01652.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831366.10.0PREDICTED: protein UPSTREAM OF FLC-like
TrEMBLA0A022RQF70.0A0A022RQF7_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52061315