PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01560.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 275aa    MW: 31038.6 Da    PI: 5.3509
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01560.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY68.21.2e-21119187259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEE........EEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvv........eitYegeHnhe 59 
                       +Dgy WrKYGqK++ g+++pr+YYrCt++   gC ++k+v++ +++p+++        +++Y+g+H+++
  Migut.N01560.1.p 119 NDGYYWRKYGQKDILGANYPRAYYRCTHRytqGCLATKQVQQMDKNPSTTttttttnsQVVYKGTHTCT 187
                       8***************************99999***********9998872222222235699999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.2E-20116188IPR003657WRKY domain
SuperFamilySSF1182901.09E-19118188IPR003657WRKY domain
SMARTSM007741.3E-31118188IPR003657WRKY domain
PROSITE profilePS5081118.36118173IPR003657WRKY domain
PfamPF031066.0E-21119186IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MEKESVITSQ LSEGMEIAKE LKRKIDQPPS SSSTYSLQEY SILIDKLVSC YDNAISILLE  60
NEAPLVNSCA VTNYALEGSP TSEVSHLDST EHVCKHVNKK RKNSGRWSEQ VNVCGVEIND  120
GYYWRKYGQK DILGANYPRA YYRCTHRYTQ GCLATKQVQQ MDKNPSTTTT TTTTNSQVVY  180
KGTHTCTQQR HILKVESQQQ LVNITNVEPE TNAVETDHRF FVDPQRTYSP PTNDFLTSHS  240
LLSPDINFPP GDIDLLIDDD VDFDYRFLGA PGFF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-15111171969Disease resistance protein RRS1
5w3x_D3e-15111171969Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01560.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835649.10.0PREDICTED: probable WRKY transcription factor 53
TrEMBLA0A022RJ291e-147A0A022RJ29_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.N01560.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55532237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.12e-26WRKY family protein