PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01518.1.p
Common NameLOC105956316, MIMGU_mgv1a001704mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 771aa    MW: 84725.2 Da    PI: 6.5428
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01518.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.25.7e-162468147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r rWT+eE+ ++++a k++G   W +I +++g ++++ q++s+ qk+
  Migut.N01518.1.p 24 RERWTEEEHNRFLEALKLHGRA-WQRIEEHIG-TKSAVQIRSHAQKF 68
                      78******************88.*********.************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.96E-161874IPR009057Homeodomain-like
PROSITE profilePS5129419.6911973IPR017930Myb domain
TIGRFAMsTIGR015574.7E-152271IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.0E-72364IPR009057Homeodomain-like
SMARTSM007172.3E-122371IPR001005SANT/Myb domain
PfamPF002492.8E-132467IPR001005SANT/Myb domain
CDDcd001673.83E-92669No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009733Biological Processresponse to auxin
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0042754Biological Processnegative regulation of circadian rhythm
GO:0043433Biological Processnegative regulation of sequence-specific DNA binding transcription factor activity
GO:0046686Biological Processresponse to cadmium ion
GO:0048574Biological Processlong-day photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 771 aa     Download sequence    Send to blast
MDHYSSGEDL LIKTRKPYTI TKQRERWTEE EHNRFLEALK LHGRAWQRIE EHIGTKSAVQ  60
IRSHAQKFFT KLEKEATVKG VPVGHAIDIE IPPPRPKRKP SNPYPRKTSV GAPTSHVTVK  120
DGKISNPLSS KITIEKESEE PCDDGKLENS NEYHETDNWS EAYTLLKTAP CASPSSTNKS  180
SLSMSDAPGK SCTFRQYIPL PKEAGNQDEV VVSKVTIETK GLAAEKCDDK KYFQDKAPSN  240
ISNVVNSYLS HEKYVHSKRI AELKKSENAL PIADVLSSQN YPRHVNVHIV DGIPGASAQT  300
ISPDGSCTDS TFHQMGGVYG HQNLFMKPAE HYSNASGSSV HQSFPSYHPI FTPNQNQDDY  360
LHMSSTFSSL IVSALSQNLA AYAAASFTAS LWPCVNMEAP IESSDGAFQS RPLSSVPSMG  420
SIAAATVAAA TAWWTAHGLL PLPAQFLPGF TCSPASVSAT PMESSEGRVI NSEKRENTPN  480
PALGGQQLEP DCSKALHEQH SASKSPMLSS SDSEASESAK LNVGLATAET TKVSETDELD  540
NDVNKSKNQK LVDRSSCGSN TSSSSDVETD ALEKHAKGTE ENHMNGEEEP EEVDANHPLG  600
DPFNRRCRSI ININDSWKEV SEGGRLAFRA LFSRERLPQS FSPPHDVKNK GEKNYTENEQ  660
KKDESGVRLD LNAKTWESCW QKQGVENNGS LIGENKEEGL LDLGLGLAAA NKLKAPRRTG  720
FKPYKRCAME AKESRMAPNS HNEEKCPKRL RMDEQEDHAS STKLFSLYPI *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00119DAPTransfer from AT1G01060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01518.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835616.10.0PREDICTED: protein LHY isoform X1
RefseqXP_012835617.10.0PREDICTED: protein LHY isoform X1
TrEMBLA0A022REQ00.0A0A022REQ0_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA97101315
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01060.43e-44MYB_related family protein