PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01433.2.p
Common NameLOC105960543, MIMGU_mgv1a011571mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 236aa    MW: 26684.8 Da    PI: 5.6793
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01433.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.97.1e-162570148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg++T +E++l +++++ lG++ W++Ia+ ++ gRt++++k+ w+++l
  Migut.N01433.2.p 25 RGPFTHDEEKLVIQLHAILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 70
                      89********************.*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500904.484119IPR017877Myb-like domain
SuperFamilySSF466896.42E-22679IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.2E-10631IPR009057Homeodomain-like
PROSITE profilePS5129423.8432074IPR017930Myb domain
SMARTSM007171.2E-132472IPR001005SANT/Myb domain
PfamPF002496.3E-152570IPR001005SANT/Myb domain
CDDcd001673.14E-112770No hitNo description
Gene3DG3DSA:1.10.10.601.8E-213271IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MTGLFRCGKS CRLRWNNYLR PDIIRGPFTH DEEKLVIQLH AILGNRWAAI ASQLPGRTDN  60
EIKNLWNTHL KKRLLQMGIN PQTHEPSSTL SNGLPSTRHM AQWESARLEA EARLSKESRP  120
LINPSPPDGK SDGDYFMRLW NSEVGETFRK VDKKTEYSVS QSPVFSGTTT ETGLLTERKN  180
EDFLTGSDSC IDNEMDDSSE SSSLQLLLDF PSNNDMSFLG QPDCYYNSLY PSIFT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A2e-2067440108B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that may play a role in flower development by repressing ANT (PubMed:19232308). Regulates the transition of meristem identity from vegetative growth to flowering. Acts downstream of LFY and upstream of AP1. Directly activates AP1 to promote floral fate. Together with LFY and AP1 may constitute a regulatory network that contributes to an abrupt and robust meristem identity transition (PubMed:21750030). {ECO:0000269|PubMed:19232308, ECO:0000269|PubMed:21750030}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01433.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012840186.11e-173PREDICTED: myb-related protein Zm38
SwissprotQ9M2D93e-88MYB17_ARATH; Transcription factor MYB17
TrEMBLA0A022R5121e-172A0A022R512_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.12e-78myb domain protein 17