PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01142.1.p
Common NameMIMGU_mgv1a0208052mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 324aa    MW: 35694.1 Da    PI: 4.8917
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01142.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.4e-112763161055
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+RR+riN+++  L+ l+P+      +K++ +++Le+AveY+k Lq
  Migut.N01142.1.p 276 RKRRERINERLRVLQNLVPNG-----TKVDISTMLEEAVEYVKFLQ 316
                       9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.01E-13266320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.351266315IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-12271319IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.7E-12272321IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.42E-13275320No hitNo description
PfamPF000104.1E-8276316IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MEASVGTISE GEWNSTFIGM CSDEADFMAQ LLGSCSTPNE SSTGFAWPIY ESNTGFAGDG  60
SMYSPEETNN NNNNNNNNNT ASMYSSSWSA TSNNSQECYY PGSSVSHQFF GNSNNNLVAM  120
DHIYCPNNGN AMEGYHEFMN PDVGGDAMEY SDEKPMEQKL LMPEQPLKAC EISKKRTRIN  180
GEVQRSKRSM KTKNCRKFDD DEEDNNNNNN NKSNAVLNRQ SSSVGCSEDN SIVSHEMKGV  240
ASGLCSKGSG PASLSVSEKT RAGRGSATDP QSLYARKRRE RINERLRVLQ NLVPNGTKVD  300
ISTMLEEAVE YVKFLQLQIK VRN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01142.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835317.10.0PREDICTED: transcription factor bHLH85-like
TrEMBLA0A022RH060.0A0A022RH06_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.N01142.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.13e-27ROOT HAIR DEFECTIVE 6-LIKE 2